Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------------------------MGDAVKVIAEELKGYIERIEKLEQEKKNVQDQIHDVYAKAADKGWNIKVMKQIIRLRKM----EDGDRAEQEILLNTYKRALGMSCEEN------------------------------------------------- |
| 1QSP Chain:A ((3-167)) | TIPSEIINWTILNEIISMDDDDSDFSKGLIIQFIDQAQTTFAQMQRQLDG----EKNLTELDNLGHFLKGSSAALGL-QRIAWVCERIQNLGRKMEHFFPNKTELVNTLSDKSIINGINIDEDDEEIKIQVDDKDENSIYLILIAKALNQSRLEFKLARIELSKYYNTNL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QSP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -9856 for 445 contacts (-22.1/contact) +
2D Compatibility (PS) -8660 + (NN) -4933 + (LL) 468
1D Compatibility (HY) -800 + (ID) 400
Total energy: -24181.0 ( -54.34 by residue)
QMean score : 0.495
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