Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIRGIGTDIVYIPRILRILQKYGKKFLNKIYTEQEIEISRKYNSQEMQAKYLAKRFAAKEAFVKALGGFSHGIIMKDIEIYNDVRGKPHLTVSKNFIFKDHMIHLSLSDDGDCATAFVIICSSLP
4DXE Chain:C ((25-141))
MIHGIGVDLIEIDRIQALYSKQ-PKLVERILTKNEQHKFNNFTHEQRKIEFLAGRFATKEAFSKALG------AFNDIDCYNDELGKPKID------YEGFIVHVSISHTEHYAMSQVVLEKSA-
General information:
TITO was launched using:
RESULT:
Template:
4DXE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -74833 for 797 contacts (-93.9/contact) +
2D Compatibility (PS) -12306 + (NN) -5645 + (LL) 496
1D Compatibility (HY) -8800 + (ID) 2050
Total energy: -103138.0 ( -129.41 by residue)
QMean score : 0.509
(partial model without unconserved sides chains):
PDB file :
Tito_4DXE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4DXE-query.scw
PDB file :
Tito_Scwrl_4DXE.pdb
: