Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSDLKTMMLNFGPQHPAAHGVLRLVLEMDGEIIERADPHIGLLHRGTEKLIEHKTYLQALPYFDRLDYVSPMSQEHAYSLCVEKLLQCEVPIRAKYLRVLFCELTRILNHLLNISSQAL-DVGAMTP----------------------------------------------------------------------LLWLFEEREKILEFYERASGARFHAAYIRPGGVAADV--PEGLIEDIAKFIEQFPQYIDDV------------DEL--------LTENRIW---------KQRTVGISEISIK--------------------------------------------QALD----------WGFSGPMLRAAGLA----WDLRKSQPYEIYDQLDFDIPVGQNGDCYDRYLVRMEEIRQSVSLVKQCIEKIPEGPVKTEDRKISPPPRTEMKRSMEALIHHFKLYSEGYHVPEGEAYAAVEAPKGEFGVYIVSDGTNRPYRCRIRAPGFAHLQALD---------FMAKGHMLAD------VAAIIGSLDIVFGEIDR |
| 1E3D Chain:B ((13-541)) | ------GPIVVDPLT-RIEGHLRIEVEVEGGVIKEARS-CATLFRGIETILKGRDPRDAQHFTQRTCGVCTYTHALASTRCLEDAINKPIPANATYIRNLVLGNQFMHDHLVHFYHLHALDFVDVTSALLADPAKAAKLANSISPRKATTEEFAAVQAKLKTFVASGQLGPFTNAYFLGGHEGYYMDPEANLVCTAHYLQALRAQVEVAKGMAVFGAKNPHTQFTVAGGVTCYEALTPERIKQFRELYVKARAFIEEVYIPDLLLVASYYKDWGKIGGTNNFMAFGEFPAPGGERDLNSRWYKPGVIYDRKVGSVQPFDPSKIEEHVRHSWYEGKARAPFEGETNPHFTFMGDTDKYSWNKAPRYDGHAVETGPLAQMLVAYGHNHKTIKPT-IDAVLGKLNLG--PEALFSTLGRTAARGIQTLVIAQQMENWLNEYENNIVKDK-Q-IV--------------------E-DYAVPTSARGVGFADVSRGGLSHWMTIE-DGKIDNFQLVVPTTWNLGPRDDKGVPSAAEAALVGTPVADPKRPVEILRTIHSFDPCIACSTH |
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General information:
TITO was launched using:
| RESULT:
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Template: 1E3D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -180392 for 2926 contacts (-61.7/contact) +
2D Compatibility (PS) -36796 + (NN) -9376 + (LL) 1748
1D Compatibility (HY) -5600 + (ID) 2750
Total energy: -233166.0 ( -79.69 by residue)
QMean score : 0.357
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