Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSKDTV-ITEEIIEHAKYYVKHKSHISEYPGGLESEKQVLTKILGFLEGKFNNMQLDSDLVDKPATLNQAVDEADDEQLQSPEPKSADGC
2GTS Chain:A ((4-80))
----VQMDTEEVREFVGHLERFKELLREEVNSLSNHFHNLE------SWRDARRDKFSEVLDNLKSTFNEFDEAAQEQIAWLKERIR---
General information:
TITO was launched using:
RESULT:
Template:
2GTS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 16406 for 374 contacts (43.9/contact) +
2D Compatibility (PS) -7811 + (NN) 1126 + (LL) 644
1D Compatibility (HY) 3200 + (ID) 350
Total energy: 13215.0 ( 35.33 by residue)
QMean score : 0.065
(partial model without unconserved sides chains):
PDB file :
Tito_2GTS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2GTS-query.scw
PDB file :
Tito_Scwrl_2GTS.pdb
: