Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLSRVKVNKDNKNANSGKQARFDLNRMNFMINGKIVDKEYIIRLYGENNYLIPNGSEDYRLFAKRVFTGMFEYAKAEVPNNRILEKLVINCNQAGYEFAIYE
3QKS Chain:C ((353-379))
--------------------EFELKIIDIL------DFDYIIKLITE-------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3QKS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -4904 for 81 contacts (-60.5/contact) +
2D Compatibility (PS) -2206 + (NN) -265 + (LL) 5216
1D Compatibility (HY) -4000 + (ID) 400
Total energy: -6559.0 ( -80.98 by residue)
QMean score : 0.127
(partial model without unconserved sides chains):
PDB file :
Tito_3QKS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3QKS-query.scw
PDB file :
Tito_Scwrl_3QKS.pdb
: