Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSNGTVNKVILVGNLGRNPEIRTMQNGKEMANFSIATSEGWTDKFSGVRSEKTEWHNIVIFSEGLVKVVKDFVRKGSKVYIEGSLKTRKWTDQNGSERYTTEVVLQNFNGTLTLLDSRNNAASSDYKSNEYKQDETGQKDQYENFDSEVKEELIDDEIPF
1EYG Chain:B ((2-114))
-ASRGVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESW---------EQTEWHRVVLFGK-LAEVASEYLRKGSQVYIEGQLRTRKWTDQSGQDRYTTEVVV-NVGGTMQMLG--------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1EYG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -50407 for 670 contacts (-75.2/contact) +
2D Compatibility (PS) -11376 + (NN) -4337 + (LL) 2264
1D Compatibility (HY) -12800 + (ID) 3100
Total energy: -79756.0 ( -119.04 by residue)
QMean score : 0.609
(partial model without unconserved sides chains):
PDB file :
Tito_1EYG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1EYG-query.scw
PDB file :
Tito_Scwrl_1EYG.pdb
: