Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSKNIKNILSITELLSGWL-LHDFANSMNGIMFGLEELEAGNQNDASTHREALLLLKESSDDLIYKHKV---MKQAYSSSADNRSFSQTKLNIE-NYLLKKK
1AHX Chain:B ((205-283))
----------------GWLPLFDFA--YQGFARGLEEDAEGLRAFAAMHKELIVASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSSPPA
General information:
TITO was launched using:
RESULT:
Template:
1AHX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 11462 for 369 contacts (31.1/contact) +
2D Compatibility (PS) -7448 + (NN) 3855 + (LL) 1280
1D Compatibility (HY) -2400 + (ID) 1450
Total energy: 5299.0 ( 14.36 by residue)
QMean score : 0.054
(partial model without unconserved sides chains):
PDB file :
Tito_1AHX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1AHX-query.scw
PDB file :
Tito_Scwrl_1AHX.pdb
: