Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIVDSHCHLIYFS----DDEIPEVISRAEQNGVKILHNICVNADDVPKLLKIASSYNQVYSSIGIHPLDASVENGKCMHADELVELIKNQKVVSIGETGLDFYKSN-NKSNQKKSFASHIEAARITGLPLVIHTRGVDSEVIDMLKSEMKNGPFNGVM-HCFTSSKELAHQSIDLGLYISFSGIITFKNASLLRRIAQDVPRERVLVETDAPYLSPEPHRGKKNEPAMVKYVVDCLAELWSASPDKVAEVTTNNFFRLFTKLKLKEIL |
1YIX Chain:A ((2-261)) | FLVDSHCHLDGLDYESLHKDVDDVLAKAAARDVKFCLAVATTLPSYLHMRDLVGERDNVVFSCGVHPLNQNDP--YD--VEDLRRLAAEEGVVALGETGLDYYYTPETKVRQQESFIHHIQIGRELNKPVIVHTRDARADTLAILREE-KV-TDCGGVLHCFTEDRETAGKLLDLGFYISFSGIVTFRNAEQLRDAARYVPLDRLLVETDSPYLAPVPHRGKENQPAMVRDVAEYMAVLKGVAVEELAQVTTDNFARLFHIDASRLQS |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YIX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -139380 for 2270 contacts (-61.4/contact) +
2D Compatibility (PS) -27417 + (NN) -13402 + (LL) 36
1D Compatibility (HY) -16800 + (ID) 5000
Total energy: -201963.0 ( -88.97 by residue)
QMean score : 0.563
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