Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNINIFVFLALSFVTSFNSIQAQILYTWSQVIPDNKLSVRAIIDSNTCPVAYVDGKGVEMLNRSSINNGDHTETICEMIVETGAQNISIDGIQVPILPEKISRIAFIGDTGCRINALFQQECNSVDSWPFKKNLDSIALHEPDLIVHVGDYHYRKTKCRNAQKCGNIYGYNKEAWYADWFEP-AKDILLQSSFLFVRGNHEN--CDRAYEGWFRYLDSHPFSSEKCENFV-------PGWFLDIGPMKFFIFDSSSGEDIFTTQSTIDAFEKQFDKLTQDSSDKPT---WFLTHRPLWRSPKKEFLTLKSHGNLTQIEA-FGDKFP-NNVATIVSGHIHIAQILLMNNVPDQIIVGNGGALLHAQDQEPVYQNIEFSYSNGKNYLAHEIKNFFGFGFSILNLDNHEFTFYDQNNEEMYSAKLTEDFKLEIN |
1UTE Chain:A ((3-304)) | -------------------------------------------------------------------------------------------------PTPILRFVAVGDWGGVPNAPFHTAREMANAKAIATTVKTL---GADFILSLGDNFYFT----------GVHDAKDKRFQETFEDVFSDPSLRNVPWHVLAGNHDHLGNVSAQIAYSKISKRWNFPSPYYRLRFKIPRSNVSVAIFMLDTVTLCGNSDDFVSQQPERPRNLALARTQLAWIKKQLAAAKEDYVLVAGHYPVW--------SIAEHGPTHCLVKQLLPLLTTHKVTAYLCGHDHNLQYLQDENGLGFVLSGAGNFM------DPSKKHLRKVPNGYLRFHFGAENSLGGFAYVEITPKEMSVTYIEASGKSLFKTKLPRRA----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1UTE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -91466 for 2547 contacts (-35.9/contact) +
2D Compatibility (PS) -30030 + (NN) -4771 + (LL) 9268
1D Compatibility (HY) -6800 + (ID) 2100
Total energy: -125899.0 ( -49.43 by residue)
QMean score : 0.334
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