Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MHSKPPWLRAKAPTGEIFNETLNTVKLHGLHTVCEEAACPNIGECWNKRHATVMILGSVCTRACAFCNVATGI---PNKLDPHEPENLAKAIKKLNLKYVVITSVDRDDLPDGGASQFIKCIEEIRKITPETTVEILTPDFLNKKGAFEAIAVASPDVYNHNIEMV-PRLYARIRPRARYFHSLYLLKMVKQINPKLLTKSGLMVGLGETKEEVLQVMDDLRSAEVDFITIGQYLQ-PTPKHAKIDRYVTPEEFEHYKYIAYSKGFLVVASSPLTRSSYHAEEDFNRLKACR |
3T7V Chain:A ((61-244)) | -------------------------------------------------LNCFIYFSTYCKNQCSFCYYNCRNEINRYRLTMEEIKETCKTLKGAGFHMVDLTMGEDPYYY-EDPNRFVELVQIVKEEL-GLPIMI-SPG-LMDNATLLKAREKGANFLALYQETYDTELYRKLRVGQSFDGRVNARRFAKQ--QGYCVEDGILTGVGNDIESTILSLRGMSTNDPDMVRVMTFLPQEGTPLEGFRDKSNLSELKIISVLRLMFPKRLIPASLDLEGIDGMVLRLNAGANIV |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3T7V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -71597 for 1368 contacts (-52.3/contact) +
2D Compatibility (PS) -19354 + (NN) -7976 + (LL) 3000
1D Compatibility (HY) -11600 + (ID) 1300
Total energy: -108827.0 ( -79.55 by residue)
QMean score : 0.445
|
|
|