Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKIIYDYERGIENNVALTFGNFDGIHLGHELAISTLKKIAQERGFPSAILTFEPHPSTILFNRNNFRLINQEQKKELISSYGIDYLYIINFNKGFSQISCDDFISKILIDRYNTKHIIVGESCTFGHKRLGNTLILRKHSETYGYSLTKLEPLTVNGKICSSSSIREHIQKGEIEIANKLLGRSYQVSGTVMKGALRGR-EIGFPTINIPIEDCMIKPK---FGTYYAKVAFTSLDVIPARDAGIYRSQYQSNETTEGSAKGSFSGSGPSWLYGVVNIGMRPTFNDLKKPIVEMHIF-DFNEDIYDRKVNIQLLKFIRSEKRFLSVDELTKQINHDILEAYQLRTDL |
1NB0 Chain:A ((2-131)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HLPYFCRGQVVRGFGRGSKQLGIPTANFPEQVVDNLPADISTGIYYGWASVG----------------------------------SGDVHKMVVSIGWNPYYKNT-KKSMETHIMHTFKEDFYGEILNVAIVGYLRPEKNFDSLESLISAIQGDIEEAKKRLELP |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NB0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -69751 for 828 contacts (-84.2/contact) +
2D Compatibility (PS) -13660 + (NN) -3249 + (LL) 12908
1D Compatibility (HY) -7200 + (ID) 2000
Total energy: -82952.0 ( -100.18 by residue)
QMean score : 0.382
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