Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLIPKVSLCINGSTNLTQYITEVRKFPMLSQEEEVRLAKSWNQCKDISSAHKLITSHLNLVVKIAMKFKNYGLLLMDLIMEGNMGLIHAVKKFNPDLGFRFSTYAVWWIEASIKDFILKSWSFVKIGTTQAQRRLFFSLRKIKKRILQYTNRETLNNEEIKAISNELSVSEGDVIQMNYRLACKDQSLNNCIKVGGDSKKEL-QDMIPCNSVNQEVTYQNREEKELKETILNNALASLNERSRDIFISR--YLSENTQTLDELSKKYCVSRERIRQLAEQAMSKVKQHIQSESLKFSLHA |
| 4OIO Chain:F ((207-431)) | ----------------------------------------------------LIEANLRLVVSIAKKYTGRGLSFLDLIQEGNQGLIRAVEKFEYKRRFKFSTYATWWIRQAINRAIADQARTIRIPVHMVE--TINKLSRTARQLQQELGREPTYEEIAEAMGPGWDAKR---VEETLKIAQEPVSLETPI---GDEKDSFYGDFIPDEHLPSPVDAAT---QSLLSEELEKALSKLSEREAMVLKLRKGLIDGREHTLEEVGAFFGVTRERIRQIENKALRKLKYHESRTRKLRDF-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4OIO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -76297 for 1354 contacts (-56.3/contact) +
2D Compatibility (PS) -23783 + (NN) -9283 + (LL) 4888
1D Compatibility (HY) -12400 + (ID) 3750
Total energy: -120625.0 ( -89.09 by residue)
QMean score : 0.612
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