Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSTSAIFFSEGSYIVIMNNIIVKKFGGTSLTDLTRVANLIKKDV---DKGYRIIVVVSAIAGLTDQMVFQARQTLNLSHKQALSEYDVMLSAGEQISCGLLAITLLSIGVNAKSWLAWQLPIITDNSYSESKIKTIKIDHLKRSFAEGYTVAIIAGFQGIYDDRITTFGRGGSDISAVALAVAFGVRVCEIFTDIDGIYTADPKIVPKARKLKSISYDEMLEMSSSGAKILHNRSVQLAMKHNIKVQVLSTFKEVEGTAVLH--ENDVLERHTITGITYSTNEALITFTNFAN----TLRTLKDMAGANIKIDMIHGSSIVISEFDIDL-----------MKELLNKNE-----DYVINNNAAKISIIGIGVMSVMYHTLKF---FSEKKIEILAITASEIKISIIVQRECAEALVRDLHTELMCTEGG |
| 3AB4 Chain:O ((3-405)) | -------------------LVVQKYGGSSLESAERIRNVAERIVATKKAGNDVVVVCSAMGDTTDELLELAAAVNPVPPAR---EMDMLLTAGERISNALVAMAIESLGAEAQSFT------------------DVTPGRVREALDEG-KICIVA--------------RGGSDTTAVALAAALNADVCEIYSDVDGVYTADPRIVPNAQKLEKLSFEEMLELAAVGSKILVLRSVEYARAFNVPLRVRSSYSNDPGTLIAGSMEDIPVEEAVLTGVATDKSEAKVTVLGISDKPGEAAKVFRALADAEINIDMVLQN-----DGTTDITFTCPRSDGRRAMEILKK--QGNWTNVLYDDQVGKVSLVGAGMKSHPGVTAEFMEALRDVNVNIELISTSEIRISVLIREDDLDAAARALHEQFQL---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3AB4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -250498 for 2603 contacts (-96.2/contact) +
2D Compatibility (PS) -36006 + (NN) -9975 + (LL) 4428
1D Compatibility (HY) -24000 + (ID) 5850
Total energy: -321901.0 ( -123.67 by residue)
QMean score : 0.487
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