Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MENKLREIVLDTETTG---LDIESGHRIIEIGCVELINR-IPTGKVFHKYLNPER--DIPYHSFKIHGISEEFLEDKPLFSDVVFEFLDFISGDIL-------IIHNAEFDIK-FLNMELGKLNARL--ISSDRVLDTLPLARKKFVG--SPASLSALCKRFDISLENRELHGALTDAGLLAKVYVELTGGLQTFLFDNECKQDHNSAFIQHKVRNLTCREHSPSNEEINEHRKLLGKIDNPLWKERIE
1W0H Chain:A ((7-200))
-SYYDYICIIDFEATCEEGNPPEFVHEIIEFPVVLLNTHTLEIEDTFQQYVRPEINTQLSDFCISLTGITQDQVDRADTFPQVLKKVIDWMKLKELGTKYKYSLLTDGSWDMSKFLNIQCQLSRLKYPPFA-KKWINIRKSYGNFYKVPRSQTKLTIMLEKLGMDYDG-RPHCGLDDSKNIARIAVRMLQDGCELRINEKM------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1W0H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -94808 for 1357 contacts (-69.9/contact) +
2D Compatibility (PS) -18488 + (NN) -5141 + (LL) 2696
1D Compatibility (HY) -13200 + (ID) 1550
Total energy: -130491.0 ( -96.16 by residue)
QMean score : 0.388
(partial model without unconserved sides chains):
PDB file :
Tito_1W0H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1W0H-query.scw
PDB file :
Tito_Scwrl_1W0H.pdb
: