Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKVECAVDSGFATLPVLPLRDVVIFPNIVVPLFIGREKSISALEYAINNRSRQNEIFLVAQQDGSIDNPEPKDLYEVGVLANIVQPLIKLPDNAVKVVIQGVSRGKVIEYIDSHALLQARVELDSYHEYEESEDNVDLEALRRAVINAFDSWCKLNKKNHPEIIVNPVEQIKKIDQLVDTVISYLSIKASDKQSILETYSLEERLKKAFAFIEREISILNAQNRLYKTIKSQVESTQKVYYLNEQLKAIQKELGEFENGEEGNIINEFEKKINEIKLSQEAREKAMTELKRYKKMNPISPEATVISNYLYWLLDLPWGKYKDAKINLNAAKKILDENHYGIEKVKDRIIEFLAVLKRVKEIKGPILCLVGPPGVGKTSLAKSMARAVGRDFVRIALGGVRDESEIRGHRKTYIGSMPGKIIQHMKKANSCNPLFLLDEIDKMGSDSRGDPASALLEVLDTEHNKHFTDHYLEVEFNLSSVMFVATANSL-NLPHPLRDRMEIIQLSGYTEDEKINIAKYHLIPKLKKEHGLRQREWGITNDALYELIRLYTRESGVRSMERELAKLMRKAVKEILAGQNKKISVGVDNLQDYLGVRKYTFGIAEKDSLVGVVTGLAYTETGGDILMIESVLIPGKGEIKYTGKLGEVMQESIKAAYSYVRSNCLFFGIKPEKFKNNDIHLHLPEGAVPKDGPSAGSAVCTSIVSLMTNIPINKNVAMTGEVTLRGRVLAIGGLREKLLAALRGSIKTVIIPGENEKDMQEIPANIKKEINVVFVKNIDEVIKIALIRPTIPIESDNGSSALFSL |
3M6A Chain:C ((10-531)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VQTLTEKIEEAGMPDHVKETALKELNRYEKIPSSSAESSVIRNYIDWLVALPWTDETDDKLDLKEAGRLLDEEHHGLEKVKERILEYLAVQKLTKSLKGPILCLAGPPGVGKTSLAKSIAKSLGRKFVRISLG--------------------GRIIQGMKKAGKLNPVFLLDEIDKMS---------AMLEVLDPEQNSSFSDHYIEETFDLSKVLFIATANNLATIPGPLRDRMEIINIAGYTEIEKLEIVKDHLLPKQIKEHGLKKSNLQLRDQAILDIIRYYTREAGVRSLERQLAAICRKAAKAIVAEERKRITVTEKNLQDFIGKRIFRYGQAETEDQVGVVTGLAYTTVGGDTLSIEVSLSPGKGKLILTGKLGDVMRESAQAAFSYVRSKTEELGIEPDFHEKYDIHIHVPEGAVPKDGPAAGITMATALVSALTGRAVSREVGMTGEITLRGRVLPIGGLKEKALGAHRAGLTTIIAPKDNEKDIEDIPESVREGLTFILASHLDEVLEHALV------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3M6A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -282026 for 3978 contacts (-70.9/contact) +
2D Compatibility (PS) -53573 + (NN) -18709 + (LL) 22012
1D Compatibility (HY) -46800 + (ID) 13400
Total energy: -392496.0 ( -98.67 by residue)
QMean score : 0.510
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