Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDNNNDDLHYCSFCNKAQNEVDKLITNSSDGLKVFICNECIELSHKAISQKKGGSFNSDYMSDVKLLLKKPEDIKIFLSKHVVGQEHAQHVLSVAMYNHCQSMAQFNAISDVEIEKSNVMLIGPTGSGKTLLAKTLAKVSDVPFAMADATTLTEAGYVGDDVESVLSRLLQAANYDVAKAQRGIVFIDEIDKITRKSESTSITRDVSGEGVQQALLKIMEGTVAYVPPQGGRKHPQQEFIQVDTNNILFICGGAFEGLNKIIEAR-KKGTSVGFGADISQSKEQKKKNTLHDVQPEDLIKFGLIPEFVGRVPITAVLDELDHEDLVHVLIEPRNALIKQYKALLAFSKVNLEFSDEAISAIAEKAMSYKTGARMLRAILESLLLDVMYTAGNGGFEGSTIVITKEMVELGKAVINHNNKGNVITVND |
4I63 Chain:B ((3-324)) | -------------------------------------------------------------------LPTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKRLRNGDTS----LGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLT--GYVGEDVENIIQKLLQKCDYDVQKAQRGIVYIDEIDKISRK-------RDVSGEGVQQALLKLIEGT----------------FLQVDTSKILFICGGAFAGLDKVISHRVETGS--------------SEGELLAQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNALTKQYQALFNLEGVDLEFRDEALDAIAKKAMARKTGARGLRSIVEAALLDTMYDLPSMEDVEKVVIDESVIDGQSEPLLIY----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4I63.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -213605 for 2195 contacts (-97.3/contact) +
2D Compatibility (PS) -29592 + (NN) -11080 + (LL) 4744
1D Compatibility (HY) -32800 + (ID) 8750
Total energy: -291083.0 ( -132.61 by residue)
QMean score : 0.537
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