Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDLGPIIENWHEWLRCYRSYSSNTLESYMRDLKDFISFLSAHIGEEVNVGSLEKLSVPELRSWFSFRYARGINARSNTRALSVIRNFFKYIKNNYEVNNEAVFSLSRPIQRRTLPKALSISDIKTLVDFFLHNYSLQETHSSLSFQYATKKKESVLSTQLYKHCNFSLPGFQCSDTRKLIINKRTLSIKNWIPVLSIGTTEGNTKTSVKEIKLLDLGEPWIIKREIAIIVLLYGTGLRISEALNLKVSDISNESLIV-TGKGDKQRQVFILP-------VVKMFIQEYVKACPYLSVNNEAQHLFVGVRGKKLGRTYVANRLQKIRRMLNLP---EIVSPHAFRHSFATHLLQENVDIRFIQQLLGHSSLETTQVYTHLNYQDVFNMYKNFQQSLEKDKKLKL |
1Z1B Chain:A ((74-349)) | VTLHSWLDRYEKILA-SRGIKQKTLINYMSKIKAIRRGLPDA--------PLEDITTKEIAAMLNGYID-EGKAASAKLIRSTLSDAFREAIAEGHITTNHVAATRAAKS-KVRRSRLTADEYLKIYQAAESS----------------------------------------------------------------------------------------PCWLRLAMELAVVTGQRVGDLCEMKWSDIVDGYLYVEQSKTGVKIAIPTALHIDALGISMKETLDKCKEI-------LGGETIIASTRREPLSSGTVSRYFMRARKASGLSFEGDPPTFHELRSLSAR-LYEKQISDKFAQHLLGHKSDTMASQYRDDRGREWDKIEIK------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Z1B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -160107 for 1968 contacts (-81.4/contact) +
2D Compatibility (PS) -27992 + (NN) -2817 + (LL) 7780
1D Compatibility (HY) -3600 + (ID) 2350
Total energy: -189086.0 ( -96.08 by residue)
QMean score : 0.532
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