Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MYVVIINIVLLKVLMVLTITILSGGFSRERKISLMSGKAVKKALDSLSYNAIEIDVNSNTAEKLKKINPDLAFIALHGPYGEDGCIQGLLEILGIKYTHSGVMASAIAMNKAMSKHIFRSLG--------IDTPKGYIISRGDILKNNIKIDYPYVLKPINEGSSIGVH-ITFSHEDYLKLKNMFSVIPVHDAGIEEEEPVWITRDLMIIEEYIPGIELHTAVLLDEAAGTMEIRPKNKFYDYKAKYTNGFAEHIFPAEIPDNIYEMTLEHALKVHRFLGCKTISRSDFRYNPKDNTLKMLEINTHPGFTELSLVPEIAKLTKGIDFNELVKIIIEDSLQHKKILEIK |
3V4Z Chain:B ((4-305)) | --------------MAEKVAVLLGGTSAEREVSLLSGQAVLAGLKEAGIDAYGVDTKDFPVTQLKEQGFDKVFIALHGRGGEDGTLQGVLEFLQLPYTGSGVMASALTMDKLRTKLVWQALGLPISPYVALNRQQFETLSPEELVACVAKLGLPLIVKPSH-----GMSKVDHASELQKALVEAFQ----HDSDV-------------LIEKWLSGPEFTVAILGDEVLPSIRIQPP--------------TQYFCPSGLSDESEQQLAALALQAYHALDCSGWGRVDVMQD-RDGHFYLLEVNTSPGMTSHSLVPMAAR-QYGLSFSQLVARILMLAD--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3V4Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -155632 for 2237 contacts (-69.6/contact) +
2D Compatibility (PS) -29454 + (NN) -12517 + (LL) 5236
1D Compatibility (HY) -17600 + (ID) 4750
Total energy: -214717.0 ( -95.98 by residue)
QMean score : 0.384
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