Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAVENEGVLLVLSSPSGAGKTTILERLLERST--NLVRSVSMTTRKPRPGEINGKDYFFVTKKEFHELCEAGQMLEYARVFENFYGIPKSFIEQNLSSGISVLLSIDWQGAFHLFELMREKVISVFILPPSMEELRLRLQKRNSDSASEIEHRLAEAQKEMSKRDKYDYVVINDDIDKSVEEISSILDKERLKRSGV
2F3R Chain:B ((3-191))
-----QGTLYIVSAPSGAGKSSLIQALLKTQPLYDTQVSVSHTTRQPRPGEVHGEHYFFVNHDEFKEMISRDAFLEHAEVFGNYYGTSREAIEQVLATGVDVFLDIDWQGAQQIRQKM-PHARSIFILPPSKIELDRRLRG----SEEVIAKRMAQAVAEMSHYAEYDYLIVNDDFDTALTDLKTIIRAERLRMSRQ
General information:
TITO was launched using:
RESULT:
Template:
2F3R.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -98049 for 1358 contacts (-72.2/contact) +
2D Compatibility (PS) -20845 + (NN) -15665 + (LL) 584
1D Compatibility (HY) -15600 + (ID) 4150
Total energy: -153725.0 ( -113.20 by residue)
QMean score : 0.654
(partial model without unconserved sides chains):
PDB file :
Tito_2F3R.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2F3R-query.scw
PDB file :
Tito_Scwrl_2F3R.pdb
: