Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
----------MKWLDIENIAEALEEKFPGEDIVNIRFTKLKEKVLNLEGFSDDEKRCNEKILEAIQAAWIEERS
1UJ8 Chain:A ((4-76))
SHHHHHHGSGLKWTDSREIGEALYDAYPDLDPKTVRFTDMHQWICDLEDFDDDPQASNEKILEAILLVWLDEA-
General information:
TITO was launched using:
RESULT:
Template:
1UJ8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -23580 for 422 contacts (-55.9/contact) +
2D Compatibility (PS) -7094 + (NN) -5051 + (LL) -28
1D Compatibility (HY) -4800 + (ID) 1350
Total energy: -41903.0 ( -99.30 by residue)
QMean score : 0.815
(partial model without unconserved sides chains):
PDB file :
Tito_1UJ8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1UJ8-query.scw
PDB file :
Tito_Scwrl_1UJ8.pdb
: