Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSLRKNLITSESVAAGHPDKVADQISDAVLDEYLLTDPFSRTAIETLVTKDNVIIAGEVFGPNVANSTIENVVRNTIKDIGYEHD--GFHWGEVGVNMLLHEQSNDIAIGVD------QGAGDQGIMYGYATIETKSLMPAPIFYAHSILKNVMSVVKEAKLG---PDAKSQITLAYESNLPVRAESIIVSIQHPEDLDQLKVKEIIYPYVVSS-LPKGWMCAEENFFVNPTGRFVIGGPVSDCGLTGRKIMVDTYGGYIPHGGGAFSGKDATKVDRSAAYMARYLAKNIVFANLAERCLVQLSYAIGVSKPTSFYIDTFGTNKVDEERIKKLIESNIDLSTRGIIKHLSLSRPIYKRTACYGHFGKESEEDDGFSWENLNLSLDLSREFSVQSNRKVSLDC |
| 1P7L Chain:D ((2-371)) | ----KHLFTSESVSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVLVGGEI--TTSAWVDIEEITRNTVREIGYVHSDMGFDANSCAVLSAIGKQSPDINQGVDRADPLEQGAGDQGLMFGYATNETDVLMPAPITYAHRLVQRQAEVRKNGTLPWLRPDAKSQVTFQYDDGKIVGIDAVVLSTQHSEEIDQKSLQEAVMEEIIKPILPAEWLTSATKFFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVETFGTEKVPSEQLTLLVREFFDLRPYGLIQMLDLLHPIYKETAAYGHFGREH-----FPWEKTDKAQLLRDAAGLK--------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1P7L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -171347 for 3176 contacts (-54.0/contact) +
2D Compatibility (PS) -38037 + (NN) -12651 + (LL) 1032
1D Compatibility (HY) -31200 + (ID) 9800
Total energy: -262003.0 ( -82.49 by residue)
QMean score : 0.466
|
|
|