Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSWARSSAILMLSTFAAGYQEEVLTLMEKEEEEFLSHEQVKALLEKIRGEVLKTPIWHNVMDPVDDFVGRVMN
2IUW Chain:A ((45-63))
------------------------------YPGFVDVKEADWILEQLCQDVPWKQRTGIREDITYQQPRLTAW
General information:
TITO was launched using:
RESULT:
Template:
2IUW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2846 for 67 contacts (-42.5/contact) +
2D Compatibility (PS) -2083 + (NN) -1599 + (LL) 3200
1D Compatibility (HY) -1600 + (ID) 150
Total energy: -5078.0 ( -75.79 by residue)
QMean score : 0.771
(partial model without unconserved sides chains):
PDB file :
Tito_2IUW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2IUW-query.scw
PDB file :
Tito_Scwrl_2IUW.pdb
: