Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAIERTLSILKPDTVKNNIIGNINSYIEKSGLRIIAQKMMLLTKKQAELFYAIHKDRPFFGGLVEFMTSGPVIVQVLVGENAISKYRQIMGATDPKQADKGTIRGDFADDVNENRVHGSDSLENAHKEIAFFFAECELV
4S0M Chain:G ((1-139))
MAIERTLSIVKPDAVSKNHIGEIFARFEKAGLKIVATKMKHLSQADAEGFYAEHKERGFFGDLVAFMTSGPVVVSVLEGENAVLAHREILGATNPKEAAPGTIRADFAVSIDENAAHGSDSVASAEREIAYFFADNEIC
General information:
TITO was launched using:
RESULT:
Template:
4S0M.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -61134 for 1081 contacts (-56.6/contact) +
2D Compatibility (PS) -14657 + (NN) -2012 + (LL) 0
1D Compatibility (HY) -12000 + (ID) 4150
Total energy: -93953.0 ( -86.91 by residue)
QMean score : 0.442
(partial model without unconserved sides chains):
PDB file :
Tito_4S0M.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4S0M-query.scw
PDB file :
Tito_Scwrl_4S0M.pdb
: