Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYGTTILSIRKDKSVIVIGDGQVSLGHTVIKSGAKKVRRLSSDSVIAGFAGATADAFTLFERLESKLDKHPGQLMRACVELAKDWRMDKYLRKLEAMMIVADKSISLVITGTGDVLEP-EDGIAAIGSGGNFALSAAKALIDIKGISIEEIAKKAMKIAADICVYTNHNVVVEKIEG
1OFI Chain:I ((1-172))
---TTIVSVRRNGQVVVGGDGQVSLGNTVMKGNARKVRRLYNGKVLAGFAGGTADAFTLFELFERKLEMHQGHLLKSAVELAKDWRTDRALRKLEAMLIVADEKESLIITGIGDVVQPEEDQILAIGSGGNYALSAARALVENTELSAHEIVEKSLRIAGDICVFTNTNFTIEELPN
General information:
TITO was launched using:
RESULT:
Template:
1OFI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -133583 for 1487 contacts (-89.8/contact) +
2D Compatibility (PS) -18972 + (NN) -12116 + (LL) 128
1D Compatibility (HY) -18000 + (ID) 5250
Total energy: -187793.0 ( -126.29 by residue)
QMean score : 0.520
(partial model without unconserved sides chains):
PDB file :
Tito_1OFI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1OFI-query.scw
PDB file :
Tito_Scwrl_1OFI.pdb
: