Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLKIATWNVNSIRKR-VDQLCSFIVDDQIDIILLQEIKCTEEQFPYVEIEKLGYECIV-YGE-VARNGVCVLSKHPILE-KFKIDIVEGYQEARYIECLIKHNNQKMRVVSIYVPNGQSLGSHVFEYKLKFLDNLYERMDNLLKNEELIVIAGDYNVAPDEIDVFDPTLLNGQVCFHIKEREKLKAILNLGFKDAFRMSHPNLQQFSWWRYQGNSLRNNQGMRIDHMLLSPQAVDKLGICYIDDRLRKLENPSDHTPIVSIMEW
3G91 Chain:A ((3-256))
VLKIISWNVNGLRAVHRKGFLKWFMEEKPDILCLQEIKAAPEQLPRKLRHVEGYRSFFTPAERKGYSGVAMYTKVPPSSLREGFGVERFDTEGRIQIA----DFDDFLLYNIYFPNGAMS-EERLKYKLEFYDAFLEDVNRERDSGRNVIICGDFNTAHREIDLARPKENSNVSGFLPVERAWIDKFIENGYVDTFRMFNSDPGQYTWWSYRTRARERNVGWRLDYFFVNEEFKGKVKRSWILSD----VMGSDHCPIGLEIEL
General information:
TITO was launched using:
RESULT:
Template:
3G91.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -127659 for 2029 contacts (-62.9/contact) +
2D Compatibility (PS) -26879 + (NN) -14422 + (LL) 832
1D Compatibility (HY) -11600 + (ID) 3550
Total energy: -183278.0 ( -90.33 by residue)
QMean score : 0.445
(partial model without unconserved sides chains):
PDB file :
Tito_3G91.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3G91-query.scw
PDB file :
Tito_Scwrl_3G91.pdb
: