Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQDAEAKLKVKLSKRYIPPGNPGGTNFYEDEDFAESYKLYEKRRELLKKKKLQDQTNININKEKLAKKLKEKKIANLDSELSDTEACVINDEEDAMVNQHGINIARLKGAIFIDQGPISQREDEQHESERQEGKKATLTREKKVSPINVTIKDTRSKRTCSHDSIVDLNNVSSNGSDSFGSAADAVN |
| 2VAY Chain:B ((1-21)) | -------------------------------KFYATFLIQEHFRKFMKRQEE--------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2VAY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 5725 for 77 contacts (74.4/contact) +
2D Compatibility (PS) -2425 + (NN) -3820 + (LL) 8704
1D Compatibility (HY) -1200 + (ID) 200
Total energy: 6784.0 ( 88.10 by residue)
QMean score : 0.413
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