Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHDIDKQLQEQVNNLDRTEKSAAELERKIQEHKEEFMKKEKKQTTGRDKYRAYKKEQNSF
2IFO Chain:? ((1-46))
--------------SGGGGVDVGDVVSAIQGAAGPIAAIGGAVLTVMVGIKVYKWVRRAM
General information:
TITO was launched using:
RESULT:
Template:
2IFO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 14925 for 188 contacts (79.4/contact) +
2D Compatibility (PS) -5048 + (NN) -2913 + (LL) 1040
1D Compatibility (HY) -1600 + (ID) 250
Total energy: 6154.0 ( 32.73 by residue)
QMean score : 0.731
(partial model without unconserved sides chains):
PDB file :
Tito_2IFO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2IFO-query.scw
PDB file :
Tito_Scwrl_2IFO.pdb
: