Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MHKFAILFSILLAIVAYHLNNEV-----AFEVARLFSGIFISLLKLISLPLVFLSIVSTISGLKDSIEIKTLVKKTLFYTLLTTIIAAFVALSFYLLIDPVRKNFISNTIE-SASNSNYNYFSYLKLLIPSNFMQVFLKNNTIGSILIAFLMGRAIISLPKG-------KQDILHQVFSALFDTLLKIAQWLLKFIPLAVWSFITCFLHELKGGSEFYSLLWYFACIMSANSVQAFLILPLLMWCKGISPIQTLRGVMPALTLAFFSKSSSATLPTTIDCVQNKLKVPKKLSSFILPICTTINMNACATFILITVMFVAEMNGCTFSLSEIFIWIFLATGAAIGNAGVPMGCYFMATSYLVSMNVPLY------IMGLILPIYTIIDMFETAINVWSDVCVTQIINKEYKGEI |
| 2NWL Chain:A ((14-416)) | ---IKILIGLILGAIVGLILGHYGYAHAVHTYVKPFGDLFVRLLKMLVMPIVFASLVVGAASIS-PARLGRVGVKIVVYYLLTSAFAVTLGIIMARLFNPGAGIHLAVGGQQF-----PPLVHILLDIVPTNPFGALANGQVLPTIFFAIILGIAITYLMNSENEKVRKSAETLLDAINGLAEAMYKIVNGVMQYAPIGVFALIAYVMAEQGVH-VVGELAKVTAAVYVGLTLQILLVYFVLLKIYGIDPISFIKHAKDAMLTAFVTRSSSGTLPVTMRVAK-EMGISEGIYSFTLPLGATINMDGTALYQGVCTFFIANALGSHLTVGQQLTIVLTAVLASIGTAGVPGAGAIMLAMVLHSVGLPLTDPNVAAAYAMILGIDAILDMGRTMVNVTGDLTGTAIVAKTE---- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2NWL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -473483 for 3372 contacts (-140.4/contact) +
2D Compatibility (PS) -39731 + (NN) -18943 + (LL) 260
1D Compatibility (HY) -31200 + (ID) 4750
Total energy: -567847.0 ( -168.40 by residue)
QMean score : 0.388
|
|
|