Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MINKRLLLLILYFTITGCNIDCVEPGLQSRNTSVNVDVPVHKADEGTEIHWVDSGQVISKGEEIKFTLDGSINFCPLKEDKNPRKVLVPAVFCADGSIPSYSDELINNSGLNEQEVCKNVGFGNSQSYSKRRYVDTGIKVNFGDRLRFRLVPREITIDHGNPGGKGISFDDNCYRTEKGDDKATIKDMLNGGTFYCENNGKRIAEKFPQLSKENMERREVLVGNGYTPYDNKVHFNRGYIQDESPWMHGSLLDLRRTKIGLNELCDGKDCDFNKIQKQSSTKIELDQLCKRGKCDSDEIKKYSSYELNCYYQNVCYTERGIWNYSSHENKERNCVSSIRYNKYDKGNKCDMYSYLEEIQKRLKSTEQNKQDTEQVNKNNKDSGDEDDEEDKDISRAEALVAKISDPGGASIPGSERYDMKDTAKGTQCLPKRKGAHENLVCSELNDNFRHFSLRLNHDYAIDMEGVKPNSSVMLAIADYGHYYYNRGGYHVEVTRSCEYINGQKLYMYLGDEPPKDLRGIGTSDFQIVGVRKGKDEYIILDVISGEHFRDGESKKIYFGIDVRSAEKDDITDKNGRYYENNKYIVTLFIKRKINDFISSNINKIFNFIKKEVIGDSVKVSYEGYTKSLLQGVRALLTLYVIFTVVGYMLGTIQLSKFDFIIRMMKIAFIAFALSDRSWELFGMTLSKLFMDGSTYLVDSFSGYIGEGSERFAFLDLTAGVLFTGETWLKFLSLMLAGPFGFVTFLIILHASFTFLQCIISATFKYVISTILVAFLLSLTPLFIIFILFQQTKSLFDNWIKTLAHVVVQPVVLFSSLSILNQLMYSALYNLTNFSACYQCLISVNFLSYDLCIMKSILPLGYNPGTSVDVALNTGERTGGHFAALPIDLIQAFIYLIIAGTMEVFVGASEAVAQAIFGAGYGIINGVSNVASSASQSILSTVGLDRDTQGNIKRIRGAIHKDPAEIKAQLPTPKESQAEKLSDVSNKEKPDDGKDAKKKQKQTEEQLKAPSKKKRSNQEDSGEATSTSSDDHQSKEDEKKN |
1A36 Chain:A ((467-538)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EKSMMNLQTKIDAKKEQLADARRDLKSAKADAKVM-KDAKTKKVVESKKKAVQRLEEQLMKLEVQATDREENKQIALGTSKLNFLDPRITVAW |
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General information:
TITO was launched using:
| RESULT:
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Template: 1A36.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 51149 for 417 contacts (122.7/contact) +
2D Compatibility (PS) -7869 + (NN) 1288 + (LL) 57100
1D Compatibility (HY) -1200 + (ID) 500
Total energy: 99968.0 ( 239.73 by residue)
QMean score : 0.330
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