Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFKEERTMTNYTVDTLNLGKFITESGEVIDNLRLRYEHVGYH---GQPLVVVCHALTGNHLTY----GTDDYPGWWREIID-GGYIPIHDYQFLTFDVIGS--PFGSSSPL----ND----PHFPKKLTLRDIVRANERGIQALGYDK-INILIGGSLGGMQAMELLYNQQFEVDKAIILAATSRTSSYSRAFNEIARQAIHLGGK------------EGLSIARQLGFLTYRSSKSYDERFTPD-----------EVVAYQQHQGNKFKEHFDLNCYLTLLDVLDSHNIDRGRTDVTHIFKNLETKVLTMGFIDDLLYPDDQVRALGERFKYHR-----HFFVPDNVGHDGFLLNFSTWAPNLYHFLNLKHFKRK |
| 2PL5 Chain:A ((5-365)) | -----GSIGIIETKYAEFKELILNNGSVLSPVVIAYETYGTLSSSKNNAILICHALSGDAHAAGYHSGSDKKPGWWDDYIGPGKSFDTNQYFIICSNVIGGCKG-SSGPLSIHPETSTPYGSRFPF-VSIQDMVKAQKLLVESLGIEKLF-CVAGGSMGGMQALEWSIAYPNSLSNCIVMASTAEHSAMQIAFNEVGRQAILSDPNWKNGLYDENSPRKGLALARMVGHITYLSDDKMREKFGRNPPRGNILSTDFAVGSYLIYQGESFVDRFDANSYIYVTKALDHYSLG-KGKELTAALSNATCRFLVVSYSSDWLYPPAQSREIVKSLEAADKRVFYVELQS-GEGHDSFLLKNPKQIEILKGFLENP----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2PL5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -196972 for 2640 contacts (-74.6/contact) +
2D Compatibility (PS) -34184 + (NN) -12211 + (LL) 1156
1D Compatibility (HY) -20400 + (ID) 4600
Total energy: -267211.0 ( -101.22 by residue)
QMean score : 0.495
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