Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRIVNGPIIMTREERMKIVHEIKERILDKYGDDVKAIGVYGSLGRQTDGPY-SDIEMMCVMSTEEAEFSHEWTTGEWKVEVNFDSEEILLDYASQVESDWPLTHGQFFSILPIYDSGGYLEKVYQTAKSVEAQTFHDAICALIVEELFEYAGKWRNIRVQGPTTFLPSLTVQVAMAGAMLIGLHHRICYTTSASVLTEAVKQSDLPSGYDHLCQFVMSGQLSDSEKLLESLENFWNGIQEWTERHGYIVDVSKRIPF |
| 1R89 Chain:A ((16-70)) | ------PDEEEVRKGREAEEELRRRLDE----LGVEYVFVGSYARNTWLKGSLEIDVFLLFPEEF------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1R89.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -12693 for 272 contacts (-46.7/contact) +
2D Compatibility (PS) -6095 + (NN) -5702 + (LL) 14540
1D Compatibility (HY) -1200 + (ID) 450
Total energy: -11600.0 ( -42.65 by residue)
QMean score : 0.345
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