Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKYDDFIVGETFKTKSLHITEEEIIQFATTFDPQYMHIDKEKAEQSRFKGIIASGMHTLSISFKLWVEEGKYGEEVVAGTQMNNVKFIKPVYPGNTLYVIAEITNKKSIK--KENGLVTVSLSTYNENEEIVFKGEVTALINNS
3EXZ Chain:A ((16-157))
LFLEDLAVGDRFDSARHRVEAAAIKAFAGEFDPQPFHLDEEAARHSLFGGLAASGWHTAAITMRLLVTSGLPLAQGI-IGAGTELSWPNPTRPGDELHVETTVLAITPSKSRPDRAIVTCQSDTLNQRGEVVQRSTAKVVVFR-
General information:
TITO was launched using:
RESULT:
Template:
3EXZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -8000 for 1035 contacts (-7.7/contact) +
2D Compatibility (PS) -14538 + (NN) 2535 + (LL) 64
1D Compatibility (HY) -400 + (ID) 1450
Total energy: -21789.0 ( -21.05 by residue)
QMean score : 0.285
(partial model without unconserved sides chains):
PDB file :
Tito_3EXZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3EXZ-query.scw
PDB file :
Tito_Scwrl_3EXZ.pdb
: