Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKTTTQELKQYITRLFQLSNNETWECEALEEAA-ENILPERFINDSPLAHLTLETYT-YYNNELHDLSIYPFLMYANNQLISVGYLNHFDMDFLYLTDTKNTIIDERHLLREGGTHHE
1NH2 Chain:D ((19-85))
-------------------------VDALDTLISDGRIEAS------LAMRVLETFDKVVAETLKD-NTQSKL-TVKGNLDTYGFCD-------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1NH2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9752 for 185 contacts (-52.7/contact) +
2D Compatibility (PS) -5706 + (NN) -1121 + (LL) 4596
1D Compatibility (HY) -2800 + (ID) 600
Total energy: -15383.0 ( -83.15 by residue)
QMean score : -0.143
(partial model without unconserved sides chains):
PDB file :
Tito_1NH2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1NH2-query.scw
PDB file :
Tito_Scwrl_1NH2.pdb
: