Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVPTVVIDLVDQLKGNYSIKLILEVLNIPKSTYYRWKNKTYKN-----------------DTVTQKVIELCEANHYTYGYRKITALINQCYTS-----PINHKRVQRMMQKHHLNCRVRPKKTTRIGKPYYKTDNLLQR
2K27 Chain:A ((27-141))
-PEVVRQRIVDLAHQGVRPCDISRQLRVSHGCVSKILGRYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQN-PTMFAWEIRDRLLAE-GVCDNDTVPSVSSINRIIRTKVQQPFN---------------------
General information:
TITO was launched using:
RESULT:
Template:
2K27.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32307 for 517 contacts (-62.5/contact) +
2D Compatibility (PS) -9779 + (NN) -2036 + (LL) 1308
1D Compatibility (HY) 0 + (ID) 600
Total energy: -43414.0 ( -83.97 by residue)
QMean score : 0.586
(partial model without unconserved sides chains):
PDB file :
Tito_2K27.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2K27-query.scw
PDB file :
Tito_Scwrl_2K27.pdb
: