Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-------MTQGWWFPVMASAFLIFTIVIMFIAGTGQYGLGEKGTVDAFVNGASSLVGVSLIIGLARGINLVLNKGMISDTILHFSSSIVQHMSGPLFIIVL-LFIFFCLGFIVPSSSGLAVLSMPIFAPLADTVGIPRFVIVTTYQFGQYAMLFLAPTGLVMATLQMLNV-RYSHWLRFV-----WPVVAFVLIFGGGLLITQVLIYS--------------
1UTH Chain:A ((94-312))
TRNSFDPFASTRTFNLAMTDIGEMYFMPPLMEALAQRAPHIQISTLRPNAGNLKEDMESGAVDLALGLLPELQTGFFQRRLFRHRYVCMFRKDHPSAKSPMSLKQFSELEHVGVVALNT---GHGEVDGLLERAGIKRRMRLVVPHFIAIGPILHSTDLIATVPQRFAVRCEVPFGLTTSPHPAKLPDIAINLFWHAKYNRDPGNMWLRQLFVELFSEAHHH
General information:
TITO was launched using:
RESULT:
Template:
1UTH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -195118 for 1399 contacts (-139.5/contact) +
2D Compatibility (PS) -20255 + (NN) -1279 + (LL) 512
1D Compatibility (HY) 3600 + (ID) 1100
Total energy: -213640.0 ( -152.71 by residue)
QMean score : 0.113
(partial model without unconserved sides chains):
PDB file :
Tito_1UTH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1UTH-query.scw
PDB file :
Tito_Scwrl_1UTH.pdb
: