Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---MISTSEHSIFKNPAKNDGLRVRTIEVSEKF-----TSSAQNSDTIKKVVSQNNGHVLPIIAQFLLDNTNDVTSLFQKEDSVFYQLLSTESSNTGIRMIKHYATL-TTTAHILNQSLDLQLNVSSIKNYL--LSYHNETVSERSLADKAMDTIVQFIAENLGKFSQQTRLANMIQNFGILSLKDDYIEVKI-IRNVFDKMLTDSQ---FEDTKNVIDALDNAGKLVSD---------------RDRKTTKRNAKDDTGKSTSLVFYQIKIDLDYADVLGLQSQGRDNVIQKHSNPSQFKNTNLE------EFMKSENTTLIVF-------------------------------------------------------------------------------- |
| 4FDT Chain:A ((21-425)) | MQTKIQKYAGTAMPYPNRTDGMTPFYINHLGRHGARFPTSRKALDKVEKVLVSAQQENGLTSEGMALLSMIRRLSRLFDGQWGKLSKLGETEQEGIAGRMIRNYPQLFSNSAKIEAIATYVPRSINSMDAFLSCMIRHNPALQVQRSEGKQYNHILRFFDLN-------KSYVNYKEKGDWLPIYKAFVHKKISPVPIMKKFLLNPEQYLDKEAEEFVMALFSVAAILPDTSIPLNLEDLFTLDEWHRYWQTQNLRQYMSKSSAPVGKMLPVAIAWPLLSEFIRSAQEVISGKSDYQANFRFAHAETVIPFVSLMGIEKTDVQVCRPDSVSVYWKDYEISPMAANVQWLFYRDRDQRIWVKILLNEEAAALPISTACFPYYSWEKTRIFFNQRIEMAKKTLSVFN |
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General information:
TITO was launched using:
| RESULT:
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Template: 4FDT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 25844 for 2009 contacts (12.9/contact) +
2D Compatibility (PS) -28331 + (NN) 2373 + (LL) 412
1D Compatibility (HY) -12400 + (ID) 2700
Total energy: -14802.0 ( -7.37 by residue)
QMean score : 0.230
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