Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKCIKTLFLSIILVVMGGWYHSAHASDSLSKSPENWMSKLDESKHLTEINMPGSHDSGSFTLTDPVKSVWAKTQGKDYLTQMKSGVRFFDIRGRASADNMISVHHGMVYLHHELGKFLDDAKYYLSAYPNETIVMSMKKDYDSDSKVTKTFEEIFREYYYNNPQYQNLFYTGSNANPTLKETKGKIVLFNRMGGTYIKSGYGADTSGIQWADNATFETKINNGSLNLKVQDEYKDYYDKKVEAVKNLLAKAKTDSNKDN-VYVNFLSVASGGSAFNSTYNYASHINPEIAKTIKENGKARTGWLIVDYAGYPWPGYDDIVSEIIDSNK |
3EA1 Chain:B ((13-293)) | ------------------------------------WMQPIPDNIPLARISIPGTHDSGTFKLQNPIKQVWGMTQEYDFRYQMDHGARIFDIRGRLTDDNTIVLHHGPLYLYVTLHEFINEAKQFLKDNPSETIIMSLKKEYEDMKGAEGSFSSTFEKNYFVDP-----IFLKTEGNIKLGDARGKIVLLKRYSGSNESGGY----NNFYWPDNETFTTTVNQ-NVNVTVQDKYKVNYDEKVKSIKDTMDETMNNSEDLNHLYINFTSLSSGGTAWNSPYSYASSINPEIANDIKQKNPTRVGWVIQDYINEKWSPL--LYQEVIRANK |
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General information:
TITO was launched using:
| RESULT:
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Template: 3EA1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -71000 for 2411 contacts (-29.4/contact) +
2D Compatibility (PS) -30712 + (NN) -15730 + (LL) 2584
1D Compatibility (HY) -24400 + (ID) 5950
Total energy: -145208.0 ( -60.23 by residue)
QMean score : 0.428
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