Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKRLNKLVLGIIFLFLVISITAGCGIGKEAEVKKSFEK---TLSMYPIKNLEDLYDKEGYRD---DQFDKNDKGTWIINSEMVIQPNNEDMVAKGMVLYMNRNTKTTNGYYYVDVTKDEDEGKPHDNEKRYPVKMVDNKIIPTKEIKDKNIKKEIENFKFFVQYGNFKDLSKYKDGDISYNPEVPSYSAKYQVTNDDYNVKQLRKRYDIPTNKAPKLLLKGTGNLKGSSVGYKDIEFTFVEKKGENIYFSDSLHLEPSEDK |
2JEO Chain:A ((21-235)) | MR------------PFLIGVSGGTASGKSTVCEKIMELLGQNEVEQRQRKVVILSQDRFYKVLTAEQKAKALKGQYNFDHPDAF---DNDLMHRTLKNIVEGKTVEVPTYDFVTHSRLPET----TVVYPADVVLFEGILV----FYSQEIRDMF-HLRLFVDTDSDVRLSRRVLRDV---RDLEQILTQYTTF-----VKPAFEEFCLPTKKYADVIIPRGVD---NMVAINLIVQHIQDILNGDI-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2JEO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 40294 for 1565 contacts (25.7/contact) +
2D Compatibility (PS) -21491 + (NN) -4889 + (LL) 1576
1D Compatibility (HY) -10000 + (ID) 1650
Total energy: 3840.0 ( 2.45 by residue)
QMean score : 0.213
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