Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MMIGSSFIPLQRVLMYFINPNDSMDQFTLEVLRLPRITLAILAGAALGMSGLMLQNVLKNPIASPDIIGITGGASLSAVVFIAFFSHLTIHLLPLFAVLGGAVAMMILLVFQTKGQIRPTILIIIGISMQTLFIALVQG----LLITTKQLSAAKAYTWLVGSLYGATFKDTIILGMVILAVVPL-LFLVIPKMKISILDDPVAIGLGLHVQRMKLIQLITSTILVSMAISLVGNIGFVGLIAPHIAKTIVRGSYAKKLLMSAMIGAISIVIADLIGRTLFLPKEVPAGVFIAAFGAPFFIYLLLTVKKL |
4PCH Chain:A ((8-271)) | EVLDTV-------------PLTEDTQYKVEAVLLPN-----FGKAAFQSRGL--------PYTMSDTLGPGAALCYSVAVINLPEIMIVWEAYRLETELLFAPQMASSGYQRANGTL-------AGIEGTQLYFWACGGGPLDVIGINPDPERLKVNEALEGPGNSDVASLQALRKQVNAANFPVELWVADPTKNDNTRYFGRVVGGGVTPPVVSYGNQSTTPLIDENGVGILCTFGSVYLTSADMV------------------GMTGLPGLPTLSADYSNQRTVQAG-----YG--RFFRVHCRQRRI |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PCH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -267511 for 1884 contacts (-142.0/contact) +
2D Compatibility (PS) -25802 + (NN) 9847 + (LL) 6556
1D Compatibility (HY) 800 + (ID) 2150
Total energy: -278260.0 ( -147.70 by residue)
QMean score : 0.041
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