Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKLATVGSLIVTSTLVFSSMPFQNAHADTTSMNVPNKQSQNVQNHRPYGGVVPQGMTQAQYTELEKTLPQLSAGSNMQDYNMKLYDATQNIADKYNVIITTNVGVFKPHAVRDMNGHALPLTKDGNFYQTNVDANGVNHGGSEMVQNKTGHMSQQDHMNQNTHMNQQPQIQQGHMQSSNHQMMSPKANMHSSNHQMNQSNKKVLPAAGESMTSSILTASIAALLLVSGLFLAFRRRSTNK |
2FYZ Chain:B ((448-479)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------DISTELSKVNASLQNTVKYIKESNHQLQSVIV----------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2FYZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 3482 for 117 contacts (29.8/contact) +
2D Compatibility (PS) -3274 + (NN) 963 + (LL) 11824
1D Compatibility (HY) 0 + (ID) 400
Total energy: 12595.0 ( 107.65 by residue)
QMean score : 0.027
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