Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTQEIAKYNVHTKAHKRKLIKRWLIAIVVLAIIIWAFAGVPSLELKSKSLEILKSIFSGLFHPDISYIYIPDGEDLLRGLLETFAIAVVGTFIAAIICIPLAFLGANNMVKLRPVSGVSKFILSVIRVFPEIVMALIFIKAVGPGSFSGVLALGIHSVGMLGKLLAEDIEGLDFSAVESLKASGANKIKTLVFAVIPQIMPAFLSLILYRFELNLRSASILGLIGAGGIGTPLIFAIQT---RSWDRVGIILIGLVLMVAIVDLISGSIRKRIV-
3FH6 Chain:G ((3-287))
MVQP------KSQKARLFITHLLLLLFIAAIMFPLLMVVAISLR---QRITPPPFPVLLWLWNSVKVAGISAIGIVALSTTCAYAFA------------RMRFPGKATLLKGMLIFQMFPAVLSLVALYALFDRLGEYIPFIGLNTHGGVIFAYLGGIALHVWTIKGYFETIDSSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVASLLLRDVNSYTLAVGMQQYLNPQNYLWGDFAAAAVMSALPITIVFLLAQRWLVN
General information:
TITO was launched using:
RESULT:
Template:
3FH6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -145565 for 1684 contacts (-86.4/contact) +
2D Compatibility (PS) -25767 + (NN) -1711 + (LL) 2384
1D Compatibility (HY) -12400 + (ID) 1600
Total energy: -184659.0 ( -109.65 by residue)
QMean score : 0.350
(partial model without unconserved sides chains):
PDB file :
Tito_3FH6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FH6-query.scw
PDB file :
Tito_Scwrl_3FH6.pdb
: