Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSEKKILILCQYFYP-EYVSSATLPTQLAEDLIANHINVDVMCGWPYEYSNHK--QVSK----------TEMHRGIRIRRLKYSRFNN----KSKV----GRIINFFSLFSKFVINIPKM-LKYDQILVYSNPPILPLIPDVLHRLLKKKYSFVVYDIAPDNAIKTGATRP--GSMIDKLMRYINRHVYKNAENVIVLGTEMKNYLLNHQISKNADNIHVIPNWYDMRQLQDNRIYN---DTF----KAYREQYDKILLYSGNMGQ-LQDMETLISFLKLNKD---QPQTLTILCGHGKKFADVKTAIEDHR--IENVK-MFEFLTGTDYADVLKIADVCIASLIKEGVGLGVPSKNYGYLAAKKPLVLIMDKQSDIVQHVEQYDAGIQIDNGDAHAIYNFINTH-S-S-KELHEMGERAHQLFKDKYTREINTMKYYNLLK |
| 3FRO Chain:A ((1-428)) | -RHMKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTPSHGRFQGEEIGKIRVFGEEVQVKVSYEERGNLRIYRIGGGLLDSEDVYGPGWDGLIRKAVTFGRASVLLLNDLLREEPLPDVVHFHDWHTV--FAGALIKKYFKIPAVFTIHRLNKSKLPAFYFHEAGLSELAPYPDIDPEHTGGYIADIVTTVSRGYLIDEWGFFRN-FEGKITYVFNGIDCSFWNESYLTGSRDERKKSLLSKFGMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPE--LEGWARSLEEKHGNVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGL----VALEAMCLGAIPIASA--VGGLRDIITN-ETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRA-MSFSWEKSAERYVKAYT |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3FRO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -221537 for 3224 contacts (-68.7/contact) +
2D Compatibility (PS) -40859 + (NN) -6934 + (LL) 372
1D Compatibility (HY) -9600 + (ID) 2500
Total energy: -281058.0 ( -87.18 by residue)
QMean score : 0.388
|
|
|