Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKRLFDVVSSIYGLVVLSPILLITALLIKMESPGPAIFKQKRPTINNELFNIYKFRSMKIDTPNVATDLMDSTSYITKTGKVIRKTSIDELPQLLNVLKGEMSIVGPRPALYNQYELIEKRTKANVHTIRPGVTGLAQVMGRDDITDDQKVAYDHY----YLTHQSMMLDMYIIYKTIKNIVTSEGVHH |
| 1AFP Chain:A ((1-51)) | ---------------------------------------------------------------------------------------------------------------ATYNGKCYKKDNICKYKAQSGKTAICKCYVKKCPRDGAKCEFDSYKGKCYC--------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1AFP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 8520 for 297 contacts (28.7/contact) +
2D Compatibility (PS) -4884 + (NN) 286 + (LL) 10508
1D Compatibility (HY) -800 + (ID) 400
Total energy: 13230.0 ( 44.55 by residue)
QMean score : 0.067
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