Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQQTIDKLQSGQISIEEPGLQEVYEEVLSSGKLKVST----TPEASDVFIIAVPTPNNDDQYRSCDISLVMRALDSILPFLEKGNTIIVESTIAPKTMDDFVKPVIENLGF--TIGEDICLVHCPERVLPGKILEELVHNNRIIGGVTK-----ACIEAGKYVYRTFVQG--EMI-ETDARTAEMSKLMENTYRDVNIALANELTKICNNLNINVLDVIEMANKHPRV--NIHQPGPGVGGHCLAVDPYFIIAKDPE---NAKLIQTGREINNSMPAYVVDTTKQIIKAL-SGNKVTVFGLTYKGDVDDIRESPAFDIYELLNQEPDIEVCAYDPHVELD-F--V----------------EHDMSHAVKDASLVLILSDHSEFKNLSDSHFDK-MKHKVIFDTKNVVKSSF---EDVSYYNYGNIFNFIDK |
| 2Y0C Chain:A ((9-460)) | MNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRFSTDIEAAVAHGDVQFIAVGTPPDE--DGSADLQYVLAAARNIGRYMTGFKVIVDKSTVPVGTAERVRAA-VAEELAKRGGDQMFSVVSNPEFLKEGAAVDDFTRPDRIVIGCDDDVPGERARELMKKLYAPFN-RNHERTLYMDVRSAEFTKYAANAMLATRISFMNELANLADRFGADIEAVRRGIGSDPRIGYHFLYAGCGYGGSCFPKDVEALIRTADEHGQSLQILKAVSSVNATQKRVLADKIVARFGEDLTGRTFAIWGLAFKPNTDDMREAPSRELIAELLSR-GARIAAYDPVAQEEARRVIALDLADHPSWLERLSFVDDEAQAARDADALVIVTEWKIFKSPDFVALGRLWKTPVIFDGRNLYEPETMSEQGIEYHPIGRP------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Y0C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -238003 for 3511 contacts (-67.8/contact) +
2D Compatibility (PS) -43422 + (NN) -5782 + (LL) 592
1D Compatibility (HY) -16800 + (ID) 5500
Total energy: -308915.0 ( -87.98 by residue)
QMean score : 0.563
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