Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MRLILIVIGL------IFTALG---IAGAVLPLLPT--TPFLLVAVFCFARSSDRFYNWLINQKIYKEYVENFYLHRGYT---LQQKIKILISLYIVIGFSIYMVDVL--AVRVGLIIMVIIQTAVLFTFVKTLPKSNHKIEE---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
| 4MND Chain:A ((40-457)) | LMKAVILAAGLGGGVPKPLVRVGGCEIILRTMKLLSPHVSEFIIVA----SRYADDIDAFLKDKGFNYKIVRHDRPEKGNGYSLLVAKNHVEDRFILTMGDHVYSQQFIEKAVRGEGVIADREPRFVDIGEATKIRVEDGRVAKIGKDLREFDCVDTGFFVLDDSIFEHAEKLRDREEIPLSEIVKLARLPVTYVDGELWMDVDTKEDVRRANRALVSAAVGDGFISRKINRKISTRISAAIVNKVNPNQMTLISFLVGAFSALASFFSIPLAGLLYQFSSILDGCDGEIARASLKMSKKGGYVDSILDRFVDFLFLAIIALLYPKTATVAMFAIFGSVMVSYTSEKYKAEFGESIRVLNYIPGKRDERIFLIMIFCLLSAISLQWIFWMFLFVAAISLTRVVVTLLAVLVS |
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General information:
TITO was launched using:
| RESULT:
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Template: 4MND.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -130273 for 726 contacts (-179.4/contact) +
2D Compatibility (PS) -12680 + (NN) 3215 + (LL) 512
1D Compatibility (HY) -4000 + (ID) 1200
Total energy: -144426.0 ( -198.93 by residue)
QMean score : 0.296
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