Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTLFLLEANNLDFASTKEELEAKAASLSTKTIPTLIEVQATENLTHGYFIVEANDEAEAKQFLTEADISIQLVKEVRLVGKDLDEVKNGDAHVDYLVTWNIPEGITMDQYLARKKKNSVHYEEVPEVEFKRTYVC----EDMSKCICLYNAPDEEAVRRARKAV-DTPIDGIEKL
1UW4 Chain:A ((4-70))
-----------------------------------------------------------------------------------------------VVIRRLPPTLTKEQLQEHLQPM-------PEHDYFEFFSNDTSLYPHMYARAYINFKNQEDIILFRDRFDGYVF------
General information:
TITO was launched using:
RESULT:
Template:
1UW4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -20353 for 345 contacts (-59.0/contact) +
2D Compatibility (PS) -6797 + (NN) -3197 + (LL) 8940
1D Compatibility (HY) -800 + (ID) 450
Total energy: -22657.0 ( -65.67 by residue)
QMean score : 0.624
(partial model without unconserved sides chains):
PDB file :
Tito_1UW4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1UW4-query.scw
PDB file :
Tito_Scwrl_1UW4.pdb
: