Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKRPKRILATIIIFLSLLFTIIYIDDIQKWFNQYTDKLTQNHKGQGHSKWEDFFRGSRITETFGKYQHSPFDGKHYGIDFALPKGTPIKAPTNGKVTRI-FNNELGGKVLQIAEDNGEYHQWYLHLDKYNVKVGDRVKAGDIIAYSGNTGKQTTGAHLHFQRMKGGVGNAYAEDPKPFIEQLPDGERSLYDL
2B0P Chain:B ((6-132))
--------------------------------------------------DASWLTSRKQLQPYGQYH---GGGAHYGVDYAMPENSPVYSLTDGTVVQAGWSNYGGGNQVTIKEANSNNYQWYMHNNRLTVSAGDKVKAGDQIAYSGSTGN-STAPHVHFQRMSGGIGNQYAVDPTSYLQ------------
General information:
TITO was launched using:
RESULT:
Template:
2B0P.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -30083 for 961 contacts (-31.3/contact) +
2D Compatibility (PS) -13448 + (NN) -6969 + (LL) 4532
1D Compatibility (HY) -7200 + (ID) 2650
Total energy: -55818.0 ( -58.08 by residue)
QMean score : 0.543
(partial model without unconserved sides chains):
PDB file :
Tito_2B0P.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2B0P-query.scw
PDB file :
Tito_Scwrl_2B0P.pdb
: