Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNKISKYIAIASLSVAVTVSAPQTTNSTAFAKSSAEVQQTQQASIPASQKANLGNQNIMAVAWYQNSAEAKALYLQGYNSAKTQLDKEIKKNKGKHKLAIALDLDETVLDNSPYQGYASIHNKPFP-EGWHEWVQAAKAKPVYGAKEFLKYADKKGVDIYYISDRDKEKDLKATQKNLKQQGIPQAKKSHILLKGKD-DKSKESRRQMV-QKDHKLVMLFGDNLLDFTDPK-EATAESREALIEKHKDDFGKKYIIFPNPMYGSWEATIYNNNYKASDKAKDKLRKNAIKQFDPKTGEVK |
| 3OCU Chain:A ((16-255)) | ----------------------------------------------------LQQQAVLGLNWMQDSGEYKALAYQAYNAAKVAFDHAKV--AKGKKKAVVADLNETMLDNSPYAGWQVQNNKPFDGKDWTRWVDARQSRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFNGV--EESAFYLKKDKSAKAARFAEIEKQGYEIVLYVGDNLDDFGNTVYGKLNADRRAFVDQNQGKFGKTFIMLPNANYGGWEGGLAEGYFKKDTQGQIKARLDAVQAWDGKL---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OCU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 14999 for 1786 contacts (8.4/contact) +
2D Compatibility (PS) -25797 + (NN) -17473 + (LL) 4500
1D Compatibility (HY) -14000 + (ID) 3750
Total energy: -41521.0 ( -23.25 by residue)
QMean score : 0.471
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