Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKMIIAIVQDQDSQELADQLVKNNF-RATKLATTG-GFLRA--GNTTFLCGVNDDRVDEILSVINQTCGNREQLVSPITPMGGSADSYIPYPVEVEVGGATVFVMPVDAFHQF
3T9Z Chain:A ((1-101))
MKMVVAVIRPEKLECVKKALEERGFVGMTVTEVKGRG----LLQKTKVEVVVSDDAVDEVVEAIVSSART--------------G----------KFGDGRIFVIPVEKSVK-
General information:
TITO was launched using:
RESULT:
Template:
3T9Z.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -56481 for 533 contacts (-106.0/contact) +
2D Compatibility (PS) -9101 + (NN) -6022 + (LL) 1652
1D Compatibility (HY) -6400 + (ID) 1100
Total energy: -77452.0 ( -145.31 by residue)
QMean score : 0.543
(partial model without unconserved sides chains):
PDB file :
Tito_3T9Z.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3T9Z-query.scw
PDB file :
Tito_Scwrl_3T9Z.pdb
: