Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSEKKGFNFNIIKNDPLDGHKGTNIGSISLDNIAPVFIDVANKEAFIDIGGMHARAKVEKGVKWITDKAAVEGDEAKEYWLCWVTTERNEQGPYYAGLTACYLLVNKA--IRRGYKSMPEHVNMMDKSMKHHIIIDQIGDENKAILKDFLMNHDEGMWKLSSDALHQAFN |
2FWT Chain:A ((8-78)) | --------------------------------------------------------------------------------------------LTRTECSACHMAYPAALLPARSWTAL---MADLPNHFGEDA---SLDEASRGQIESYLVANAADS------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2FWT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -19461 for 344 contacts (-56.6/contact) +
2D Compatibility (PS) -5724 + (NN) -59 + (LL) 6596
1D Compatibility (HY) -2000 + (ID) 200
Total energy: -20848.0 ( -60.60 by residue)
QMean score : 0.129
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